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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831853.1_cds_XP_016504698.1_18109
CDS Infomation

[gene=LOC107822655] [db_xref=GeneID:107822655] [protein=E3 ubiquitin-protein ligase SIS3-like isoform X2] [protein_id=XP_016504698.1] [location=complement(join(11416..11802,12555..12668,12793..12912,14755..14820,15084..15176,15256..15394,15886..15923))] [gbkey=CDS]
Sequence

ATGTTTGTTGATAATGGACTTGCTGCTGGAATGGGATTGGATTTGGGTTGGCAGCAGAGA
TATACTCGCTTTCGTGGAAGAATAGTTGTTCTTTCACTTCTTGCCCTGTTCCTGTATCCC
TTTCTTTGGGCTTGGACCATTATTGGGACTTTATGGTTCACTAGTGCGAGAAACTGTTTG
CCAGAAGAAGGTCAAAAATGGGGTTTCCTTATTTGGTTGCTATTCAGCTACTGCGGACTC
CTTGGCATAGCTTGCATATCAACTGGGAAGTGGTTAACTAGAAGACAAGCCCATTCATTA
CGTGCTCAACAAGGAATTCCTACTTCTGAATTCGGGGTGTTGGTTGACATGATCAGAGTG
CCAGATTGGACGTTTGCAGCAGCAGGCCAGGAGATGAGAGGAATGGGCCAAGATGCTACT
TCATACCATCCAGGAGTTTATTTAACCCAAGCTCAGAGAGAAGCAGTGGAAGCACTTATT
CAGGAACTACCAAAGTTCAGGCTGAAGGCTGTTCCTACTGACTGTAGTGAGTGCCCTATC
TGTTTGGAAGAGTTTCGCGTGGGAAACGAGGTTCGTGGTCTGCCTTGTGCTCACAACTTC
CACGTGGAATGCATTGATGAGTGGCTTCGGCTAAACGTGAAGTGCCCTAGATGCCGCTCT
TCTGTTTTCCCAAATCTTGATCTAAGTGCTTTATCAAATATCCGAGCTGACTTAGAGAAT
TCAACAGCCAACGTTGTGACAGAAGCTCGGTATATGAGATCTCAACCCTCCAGCCAGAGC
TACCTGCTGAGATTGCAAGGTTTGCTCCGCCCAGTGCGCACGCAGGACGCTGGGGTGGGC
AGTGAGGTAGATGCAACTTCAGGAACAGCTGAAAGCAGAAACCAAGCATTGACACCTCAT
CATCAGGGAAACATGGAGCCTGTACAAGTTGTGGTAGAACAGTCCCCAAGGGAGTAA

Peptide Sequence

PEP ID

XP_016504698.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase SIS3-like isoform X2 [Nicotiana tabacum]
Sequence

MFVDNGLAAGMGLDLGWQQRYTRFRGRIVVLSLLALFLYPFLWAWTIIGTLWFTSARNCL
PEEGQKWGFLIWLLFSYCGLLGIACISTGKWLTRRQAHSLRAQQGIPTSEFGVLVDMIRV
PDWTFAAAGQEMRGMGQDATSYHPGVYLTQAQREAVEALIQELPKFRLKAVPTDCSECPI
CLEEFRVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLSALSNIRADLEN
STANVVTEARYMRSQPSSQSYLLRLQGLLRPVRTQDAGVGSEVDATSGTAESRNQALTPH
HQGNMEPVQVVVEQSPRE

Transcript Sequence

Gene sequence data has not been registered.